To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("chopsticks")

In most cases, you don't need to download the package archive at all.

chopsticks

 

The snp.matrix and X.snp.matrix classes

Bioconductor version: Release (3.1)

Implements classes and methods for large-scale SNP association studies

Author: Hin-Tak Leung <htl10 at users.sourceforge.net>

Maintainer: Hin-Tak Leung <htl10 at users.sourceforge.net>

Citation (from within R, enter citation("chopsticks")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("chopsticks")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chopsticks")

 

PDF R Script snpMatrix
PDF   Reference Manual

Details

biocViews GeneticVariability, Microarray, SNP, SNPsAndGeneticVariability, Software
Version 1.32.0
In Bioconductor since BioC 2.8 (R-2.13) (4 years)
License GPL-3
Depends R (>= 2.10.0), survival, methods
Imports
LinkingTo
Suggests hexbin
SystemRequirements
Enhances
URL http://outmodedbonsai.sourceforge.net/
Depends On Me ind1KG
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source chopsticks_1.32.0.tar.gz
Windows Binary chopsticks_1.32.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) chopsticks_1.32.0.tgz
Mac OS X 10.9 (Mavericks) chopsticks_1.32.0.tgz
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