To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("gcrma")

In most cases, you don't need to download the package archive at all.

gcrma

 

Background Adjustment Using Sequence Information

Bioconductor version: Release (3.1)

Background adjustment using sequence information

Author: Jean(ZHIJIN) Wu, Rafael Irizarry with contributions from James MacDonald <jmacdon at med.umich.edu> Jeff Gentry

Maintainer: Z. Wu <zwu at stat.brown.edu>

Citation (from within R, enter citation("gcrma")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("gcrma")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gcrma")

 

PDF R Script gcrma1.2
PDF   Reference Manual
Text   NEWS

Details

biocViews Microarray, OneChannel, Preprocessing, Software
Version 2.40.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 10 years)
License LGPL
Depends R (>= 2.6.0), affy(>= 1.23.2), graphics, methods, stats, utils
Imports Biobase, affy(>= 1.23.2), affyio(>= 1.13.3), XVector, Biostrings(>= 2.11.32), splines, BiocInstaller
LinkingTo
Suggests affydata, tools, splines, hgu95av2cdf, hgu95av2probe
SystemRequirements
Enhances
URL
Depends On Me affyILM, affyPLM, bgx, maPredictDSC, maskBAD, simpleaffy, webbioc
Imports Me affycoretools, affylmGUI, limmaGUI, simpleaffy
Suggests Me AffyExpress, ArrayTools, BiocCaseStudies, panp
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source gcrma_2.40.0.tar.gz
Windows Binary gcrma_2.40.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) gcrma_2.40.0.tgz
Mac OS X 10.9 (Mavericks) gcrma_2.40.0.tgz
Browse/checkout source (username/password: readonly)
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