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geneplotter
Graphics related functions for Bioconductor
Bioconductor version: Release (2.9)
Some basic functions for plotting genetic data
Author: R. Gentleman, Biocore
Maintainer: Bioconductor Package Maintainer
To install this package, start R and enter:
source("http:///biocLite.R")
biocLite("geneplotter")
To cite this package in a publication, start R and enter:
citation("geneplotter")
Documentation
| R Script | How to assemble a chromLocation object | |
| R Script | Visualization of Microarray Data | |
| Reference Manual | ||
| Text | README | |
| Text | NEWS |
Details
| biocViews | Visualization |
| Depends | R, Biobase, annotate, lattice |
| Imports | annotate, AnnotationDbi, Biobase, graphics, grDevices, grid, methods, RColorBrewer, stats, utils |
| Suggests | Biobase, Rgraphviz, annotate, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | |
| Imports Me | DESeq, IsoGeneGUI, RNAinteract, RNAither, biocGraph, flowQ |
| Suggests Me | AgiMicroRna, BiocCaseStudies, Category, biocGraph, maDB |
| Version | 1.32.1 |
| Since | Bioconductor 1.6 (R-2.1) or earlier |
Package Downloads
| Package Source | geneplotter_1.32.1.tar.gz |
| Windows Binary | geneplotter_1.32.1.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | geneplotter_1.32.1.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Flow Cytometry and other assays
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