nucleR

Nucleosome positioning package for R

Bioconductor version: Release (2.14)

Nucleosome positioning for Tiling Arrays and Next Generation Sequencing Experiments

Author: Oscar Flores, David Rossell

Maintainer: Oscar Flores <oflores at mmb.pcb.ub.es>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("nucleR")

To cite this package in a publication, start R and enter:

    citation("nucleR")

Documentation

PDF R Script Quick analysis of nucleosome positioning experiments
PDF   Reference Manual
Text   NEWS

Details

biocViews ChIPSeq, Genetics, Microarray, Sequencing, Software
Version 1.12.0
In Bioconductor since BioC 2.9 (R-2.14)
License LGPL (>= 3)
Depends methods, BiocGenerics(>= 0.1.0), IRanges(>= 1.13.5), Biobase(>= 2.15.1), ShortRead, parallel
Imports methods, BiocGenerics, IRanges, Biobase, ShortRead, GenomicRanges, stats
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Package Downloads

Package Source nucleR_1.12.0.tar.gz
Windows Binary nucleR_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) nucleR_1.12.0.tgz
Mac OS X 10.9 (Mavericks)
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