To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm9")

In most cases, you don't need to download the package archive at all.

BSgenome.Mmusculus.UCSC.mm9

 

Full genome sequences for Mus musculus (UCSC version mm9)

Bioconductor version: Release (3.1)

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm9, Jul. 2007) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm9")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm9")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Mus_musculus
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
LinkingTo
Suggests TxDb.Mmusculus.UCSC.mm9.knownGene
SystemRequirements
Enhances
URL
Depends On Me BSgenome.Mmusculus.UCSC.mm9.masked
Imports Me BSgenome.Mmusculus.UCSC.mm9.masked
Suggests Me compEpiTools, MEDME, oneChannelGUI, RnBeads, RnBeads.mm9

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Mmusculus.UCSC.mm9_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Package Short Url http://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm9/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center