GenomeInfoDbData

This is the released version of GenomeInfoDbData; for the devel version, see GenomeInfoDbData.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5

Species and taxonomy ID look up tables used by GenomeInfoDb

Bioconductor version: Release (3.23)

Files for mapping between NCBI taxonomy ID and species. Used by functions in the GenomeInfoDb package.

Author: Bioconductor Core Team

Maintainer: Bioconductor Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("GenomeInfoDbData")):

Bioconductor Core Team. GenomeInfoDbData: Species and taxonomy ID look up tables used by GenomeInfoDb. doi:10.18129/B9.bioc.GenomeInfoDbData, R package version 1.2.15, https://bioconductor.org/packages/GenomeInfoDbData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GenomeInfoDbData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AnnotationData, Organism
Version	1.2.15
In Bioconductor since	BioC 3.5 (R-3.4) (9.5 years)
License	Artistic-2.0
Depends	R (>= 3.5.0)
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me	EuPathDB
Imports Me	countsimQC, DOTSeq, igvShiny, multiHiCcompare, Ularcirc
Suggests Me	AnnotationHubData, Bioc.gff, GenomeInfoDb, GenomicState, HubPub, ORFik, OrganismDbi, orthogene, proActiv, proBAMr, QuasR, ribosomeProfilingQC, systemPipeR, txcutr, txdbmaker
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	GenomeInfoDbData_1.2.15.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url	https://bioconductor.org/packages/GenomeInfoDbData/
Package Downloads Report	Download Stats