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Recent Commits

Last 10 commit to Bioconductor release:

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Last 10 commit to Bioconductor devel:

Rbowtie	2026-07-29 16:49:03 +0200
igvShiny	2026-07-29 16:04:15 +0200
rhdf5filters	2026-07-29 14:24:22 +0200
DiffBind	2026-07-29 11:43:46 +0100
Rarr	2026-07-29 13:07:23 +0200
gDRstyle	2026-07-29 11:06:39 +0200
Gviz	2026-07-28 17:58:00 -0700
ontoProc2	2026-07-28 20:13:45 -0400
S4Vectors	2026-07-28 16:32:33 -0700
Biobase	2026-07-28 16:32:39 -0700

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Newest Packages

Software Packages

TiDEomics	Time-course Differential Expression analysis of omics data
TraianProt	TraianProt: a user-friendly R package for wide format proteomics data downstream analysis
RBPSpecificity	RBP Inherent Specificity and Variation Sensitivity Analysis Tool
S4Cartographer	Visualize S4 class inheritance across R/Bioconductor packages
MsBackendMassIVE	Retrieve Mass Spectrometry Data from MassIVE
DAssemble	Ensemble Models for Differential Analysis
wSIR	Weighted Sliced Inverse Regression (wSIR) for supervised dimension reduction of spatial transcriptomics and single cell gene expression data
GExPipe	GExPipe: Gene Expression Pipeline Shiny Application
barmixR	Bayesian Modeling of Barcoded Tumor Mixtures for Quantitative Treatment Resistance Analysis
ontoProc2	Ontology Facilities Based on INCAtools Semantic SQL

Experiment Data Packages

curatedBreastData	Curated breast cancer gene expression data with survival and treatment information
CLAMPData	Experiment data for CLAMP package
HumanRetinaLRSData	Long-read RNA-seq gene count data from human retinal organoids
DMRsegaldata	Example DNAm Data for DMRsegal
curatedCRCData	Colorectal Cancer Gene Expression Analysis
EMTscoreData	Single-cell RNA-seq datasets of EMT responses from Cook et al. (2020)
MutSeqRData	Experimental Data for MutSeqR Examples
dominatRData	Datasets for R Package dominatR
DoReMiTra	Orchestrating Blood Radiation Transcriptomic Data
nmrdata	Example 1d NMR Data for Metabolic Profiling

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Single Package Builder

All Current Submissions

Recent Submissions

QFeaturesGUI

exploreSE

https://github.com/mqfarooqi1/BreedingExperiment

CyFj11

quantMSImageR

ggwas

MESA

MRManalyzeR

SpectraStash - serialize/restore MS objects from the Spectra BioC package

MultiAssaySpatialExperiment

BiocDuckDB

DuckDBSpatial

DuckDBGRanges

DuckDBArray

DuckDBDataFrame

SPAROscore

mdclust

DgeaHeatmap

multipletR

ClinicalVariantR

Recent Builds

fishash	2026-07-26T02:49:10
fishash	2026-07-26T02:06:25
ctdR	2026-07-24T09:41:22
SwarnSeq	2026-07-22T13:28:36
OmniAgeRData	2026-07-21T13:57:05
OmniAgeR	2026-07-21T13:46:49
GSEAlens	2026-07-21T10:36:08
GSEAlens	2026-07-21T10:07:53
OmniAgeR	2026-07-21T07:36:01
OmniAgeR	2026-07-21T07:22:33
GSEAlens	2026-07-19T15:15:19
fishash	2026-07-19T04:10:48
RBPSpecificity	2026-07-19T01:20:52
AnnotationGx	2026-07-17T17:54:27
gutenTAG	2026-07-17T15:44:40
sigvar	2026-07-17T15:43:47
DaparToolshedData	2026-07-17T08:34:16
TraianProt	2026-07-16T13:31:52
GSEAlens	2026-07-14T13:10:22
wSIR	2026-07-14T03:11:33

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Mirror Status

Last updated 2026-07-29T12:04:48-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`

URL	Mirror	Release	Devel
https://bioconductor.org/	yes	yes	yes
https://bioconductor.posit.co/	yes	yes	yes
https://bioconductor.statistik.tu-dortmund.de/	yes	yes	yes
https://ftp.gwdg.de/pub/misc/bioconductor/	yes	yes	yes
https://bioconductor.riken.jp/	yes	yes	yes
https://free.nchc.org.tw/bioconductor/	yes	no	no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.nju.edu.cn/bioconductor/	yes	yes	yes
https://mirrors.ustc.edu.cn/bioc/	yes	yes	yes
https://mirrors.westlake.edu.cn/bioconductor	yes	yes	no
https://mirrors.zju.edu.cn/bioconductor	yes	yes	yes
https://bioconductor.uib.no/	yes	no	no
https://bioconductor.unipi.it	yes	no	no
https://cran.asia	yes	yes	yes
https://mirror.aarnet.edu.au/pub/bioconductor	yes	no	no
https://mirrors.dotsrc.org/bioconductor/	yes	yes	yes
https://mirror.accum.se/mirror/bioconductor.org/	yes	no	yes

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