Analyzing DNA Microarray Data Using Bioconductor

Sandrine Dudoit, Robert Gentleman, & Rafael Irizarry
JHMI Microarray Core Facility
October 28-29, 2002

Lectures

I. Introduction to R (R manuals, R contributed documentation)
II. Pre-processing: Affymetrix GeneChip arrays (Slides in pdf)
III. Overview of the Bioconductor project (Slides in pdf)
IV. Object-oriented programming (Slides in pdf)
V. Annotation and analysis (Slides in pdf)

Scripts

Annotation and analysis

Fred Hutchinson Cancer Research Center