AnnotationDbi

Annotation Database Interface

Provides user interface and database connection code for annotation data packages using SQLite data storage.

Author Herve Pages, Marc Carlson, Seth Falcon, Nianhua Li
Maintainer Biocore Team c/o BioC user list

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("AnnotationDbi")

Vignettes (Documentation)

Package Downloads
AnnotationDbi.pdf
SQLForge.pdf
Source AnnotationDbi_1.3.12.tar.gz
Windows binary AnnotationDbi_1.3.12.zip
OS X binary AnnotationDbi_1.3.12.tgz

Details

biocViews
Annotation , Infrastructure
Depends R, methods, utils, Biobase, DBI, RSQLite
Suggests hgu95av2.db, GO.db, human.db0, mouse.db0, rat.db0, fly.db0, yeast.db0, arabidopsis.db0, zebrafish.db0, ecoliK12.db0, ecoliSakai.db0
Imports methods, utils, Biobase, DBI, RSQLite
SystemRequirements
License Artistic-2.0
URL
dependsOnMe affycoretools, annotate, Category, globaltest, goProfiles, GSEABase, oligo, ontoTools, pathRender, PGSEA, ppiStats, topGO
suggestsMe BiocCaseStudies