STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

Bioconductor version: Development (3.0)

The STRINGdb package provides a user-friendly interface to the STRING protein-protein interactions database ( ).

Author: Andrea Franceschini <andrea.franceschini at>

Maintainer: Andrea Franceschini <andrea.franceschini at>, Alexander Roth <alexander.roth at>, Christian Von Mering <mering at>, Michael Kuhn <michael.kuhn at>, Lars J Jensen <lars.juhl.jensen at>

To install this package, start R and enter:


Citation (from within R, enter citation("STRINGdb")):


PDF R Script STRINGdb Vignette
PDF   Reference Manual


biocViews Network, Software
Version 1.3.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL-2
Depends R (>= 2.14.0), png, sqldf, plyr, igraph, RCurl, plotrix, methods
Suggests RUnit, BiocGenerics
System Requirements
Depends On Me scsR
Imports Me
Suggests Me

Package Downloads

Package Source STRINGdb_1.3.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) STRINGdb_1.3.0.tgz
Mac OS X 10.9 (Mavericks) STRINGdb_1.3.0.tgz
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