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canceR

This is the development version of canceR; for the stable release version, see canceR.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1

A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC

DOI: 10.18129/B9.bioc.canceR

Bioconductor version: Development (3.24)

The package is user friendly interface based on the cgdsr and other modeling packages to explore, compare, and analyse all available Cancer Data (Clinical data, Gene Mutation, Gene Methylation, Gene Expression, Protein Phosphorylation, Copy Number Alteration) hosted by the Computational Biology Center at Memorial-Sloan-Kettering Cancer Center (MSKCC).

Author: Karim Mezhoud. Nuclear Safety & Security Department. Nuclear Science Center of Tunisia.

Maintainer: Karim Mezhoud <kmezhoud at gmail.com>

Citation (from within R, enter citation("canceR")):

Karim Mezhoud. Nuclear Safety & Security Department. Nuclear Science Center of Tunisia. canceR: A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC. doi:10.18129/B9.bioc.canceR, R package version 1.47.2, https://bioconductor.org/packages/canceR.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("canceR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("canceR")

Details

Package Archives

Follow Installation instructions to use this package in your R session.