Annotation package for FANTOM4 promoters identified from THP-1 cells

Bioconductor version: Development (3.0)

FANTOM4 promoters, liftOver'ed from hg18 to hg19, CpGs quantified

Author: Tim Triche, Jr.

Maintainer: Tim Triche, Jr. <tim.triche at gmail.com>

To install this package, start R and enter:


Citation (from within R, enter citation("FDb.FANTOM4.promoters.hg19")):


PDF   Reference Manual


biocViews AnnotationData, Homo_sapiens
Version 1.0.0
License Artistic-2.0
Depends GenomicFeatures(>= 1.7.22), Biostrings
Imports GenomicFeatures, AnnotationDbi
Suggests BSgenome.Hsapiens.UCSC.hg19, rtracklayer, matrixStats
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source FDb.FANTOM4.promoters.hg19_1.0.0.tar.gz
Windows Binary FDb.FANTOM4.promoters.hg19_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) FDb.FANTOM4.promoters.hg19_1.0.0.tgz
Mac OS X 10.9 (Mavericks) FDb.FANTOM4.promoters.hg19_1.0.0.tgz
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