Poor prognosis colon cancer is defined by a molecularly distinct subtype and precursor lesion

Bioconductor version: Development (3.0)

This package reproduces the main pipeline to analyze the AMC-AJCCII-90 microarray data set in De Sousa et al. accepted by Nature Medicine in 2013.

Author: Xin Wang <Xin.Wang at>

Maintainer: Xin Wang <Xin.Wang at>

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PDF R Script Main vignette:Poor prognosis colon cancer is defined by a molecular distinct subtype and develops from serrated precursor lesions
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biocViews Bioinformatics, ExperimentData
Version 1.1.0
License Artistic-2.0
Depends R (>= 2.15)
Imports affy, frma, frmaTools, hgu133plus2.db, hgu133plus2frmavecs, sva, rgl, ConsensusClusterPlus, cluster, siggenes, ROCR, pamr, survival, gplots, AnnotationDbi, Biobase
System Requirements
Depends On Me
Imports Me
Suggests Me

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Package Source DeSousa2013_1.1.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) DeSousa2013_1.1.0.tgz
Mac OS X 10.9 (Mavericks) DeSousa2013_1.1.0.tgz
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