To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("bladderbatch")

In most cases, you don't need to download the package archive at all.

bladderbatch

 

   

This is the development version of bladderbatch; for the stable release version, see bladderbatch.

Bladder gene expression data illustrating batch effects

Bioconductor version: Development (3.4)

This package contains microarray gene expression data on 57 bladder samples from 5 batches. The data are used as an illustrative example for the sva package.

Author: Jeffrey T. Leek <jleek at jhsph.edu>

Maintainer: Jeffrey T. Leek <jleek at jhsph.edu>

Citation (from within R, enter citation("bladderbatch")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("bladderbatch")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bladderbatch")

 

PDF R Script bladderbatchTutorial
PDF   Reference Manual

Details

biocViews CancerData, ExperimentData, MicroarrayData
Version 1.11.0
License Artistic-2.0
Depends Biobase
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me RUVcorr
Suggests Me Harman, sva
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source bladderbatch_1.11.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/bladderbatch/
Package Downloads Report Download Stats

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