To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BRAIN")

In most cases, you don't need to download the package archive at all.

BRAIN

Baffling Recursive Algorithm for Isotope distributioN calculations

Bioconductor version: Release (3.0)

Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.

Author: Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen

Maintainer: Piotr Dittwald <piotr.dittwald at mimuw.edu.pl>

Citation (from within R, enter citation("BRAIN")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BRAIN")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BRAIN")

 

PDF R Script BRAIN Usage
PDF   Reference Manual

Details

biocViews MassSpectrometry, Proteomics, Software
Version 1.12.0
In Bioconductor since BioC 2.10 (R-2.15)
License GPL-2
Depends R (>= 2.8.1), PolynomF, Biostrings, lattice
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me cleaver, RforProteomics

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BRAIN_1.12.0.tar.gz
Windows Binary BRAIN_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BRAIN_1.12.0.tgz
Mac OS X 10.9 (Mavericks) BRAIN_1.12.0.tgz
Browse/checkout source (username/password: readonly)
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