To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CGHregions")

In most cases, you don't need to download the package archive at all.

CGHregions

 

Dimension Reduction for Array CGH Data with Minimal Information Loss.

Bioconductor version: Release (3.1)

Dimension Reduction for Array CGH Data with Minimal Information Loss

Author: Sjoerd Vosse & Mark van de Wiel

Maintainer: Sjoerd Vosse <info at vossewebdevelopment.nl>

Citation (from within R, enter citation("CGHregions")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("CGHregions")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CGHregions")

 

PDF R Script CGHcall
PDF   Reference Manual

Details

biocViews CopyNumberVariation, Microarray, Software, Visualization
Version 1.26.0
In Bioconductor since BioC 2.3 (R-2.8) (7 years)
License GPL (http://www.gnu.org/copyleft/gpl.html)
Depends R (>= 2.0.0), methods, Biobase, CGHbase
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me ADaCGH2
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source CGHregions_1.26.0.tar.gz
Windows Binary CGHregions_1.26.0.zip
Mac OS X 10.6 (Snow Leopard) CGHregions_1.26.0.tgz
Mac OS X 10.9 (Mavericks) CGHregions_1.26.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/CGHregions/tree/release-3.1
Package Short Url http://bioconductor.org/packages/CGHregions/
Package Downloads Report Download Stats

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