Category

Category Analysis

Bioconductor version: Release (2.9)

A collection of tools for performing category analysis.

Author: R. Gentleman with contributions from S. Falcon and D.Sarkar

Maintainer: Bioconductor Package Maintainer

To install this package, start R and enter:

    source("http:///biocLite.R")
    biocLite("Category")

To cite this package in a publication, start R and enter:

    citation("Category")

PDF	R Script	Using Categories to Analyze Microarray Data
PDF	R Script	Using Chromosome Bands as Categories
PDF		Reference Manual
Text		NEWS

biocViews	Bioinformatics, Annotation, GO, Pathways
Depends	AnnotationDbi, Biobase
Imports	graph, methods, Biobase, AnnotationDbi, RBGL, GSEABase, genefilter, annotate, stats, utils
Suggests	EBarrays, ALL, Rgraphviz, RColorBrewer, xtable, hgu95av2.db, Matrix, KEGG.db, GO.db, SNPchip, geneplotter, limma, lattice, graph, Biobase, genefilter, methods
System Requirements
License	Artistic-2.0
URL
Depends On Me	GOstats, PCpheno, eisa
Imports Me	GOstats, PCpheno, cellHTS2, phenoTest, ppiStats
Suggests Me	BiocCaseStudies, GSEAlm, MmPalateMiRNA, cellHTS, qpgraph
Version	2.20.0
Since	Bioconductor 1.6 (R-2.1) or earlier

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