To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Heatplus")

In most cases, you don't need to download the package archive at all.

Heatplus

 

   

Heatmaps with row and/or column covariates and colored clusters

Bioconductor version: Release (3.3)

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Author: Alexander Ploner <Alexander.Ploner at ki.se>

Maintainer: Alexander Ploner <Alexander.Ploner at ki.se>

Citation (from within R, enter citation("Heatplus")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Heatplus")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Heatplus")

 

PDF R Script Annotated and regular heatmaps
PDF R Script Commented package source
PDF R Script Old functions (deprecated)
PDF   Reference Manual
Text   NEWS

Details

biocViews Microarray, Software, Visualization
Version 2.18.0
In Bioconductor since BioC 1.8 (R-2.3) (10 years)
License GPL (>= 2)
Depends
Imports graphics, grDevices, stats, RColorBrewer
LinkingTo
Suggests Biobase, hgu95av2.db, limma
SystemRequirements
Enhances
URL https://github.com/alexploner/Heatplus
BugReports https://github.com/alexploner/Heatplus/issues
Depends On Me GeneAnswers, phenoTest, tRanslatome
Imports Me
Suggests Me mtbls2, RforProteomics
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Heatplus_2.18.0.tar.gz
Windows Binary Heatplus_2.18.0.zip
Mac OS X 10.9 (Mavericks) Heatplus_2.18.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/Heatplus/tree/release-3.3
Package Short Url http://bioconductor.org/packages/Heatplus/
Package Downloads Report Download Stats

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