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Uniform interfaces to R machine learning procedures for data in Bioconductor containers

Bioconductor version: Release (3.1)

Uniform interfaces to machine learning code for data in Bioconductor containers

Author: Vince Carey <stvjc at>, Robert Gentleman, Jess Mar, and contributions from Jason Vertrees <jv at> and Laurent Gatto <lg390 at>

Maintainer: V. Carey <stvjc at>

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PDF R Script A machine learning tutorial: applications of the Bioconductor MLInterfaces package to expression and ChIP-Seq data
PDF R Script MLInterfaces Computer Cluster
PDF R Script MLInterfaces devel for schema-based MLearn
PDF R Script MLInterfaces Primer
PDF   Reference Manual
Text   NEWS


biocViews Classification, Clustering, Software
Version 1.48.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 10.5 years)
License LGPL
Depends R (>= 2.9), methods, BiocGenerics(>= 0.13.11), Biobase, annotate, cluster
Imports gdata, pls, sfsmisc, MASS, rpart, rda, genefilter
Suggests class, e1071, ipred, randomForest, gpls, pamr, nnet, ALL, gbm, mlbench, hgu95av2.db, som, RColorBrewer, hu6800.db, lattice, caret (>= 5.07), golubEsets, ada, keggorthology, kernlab, mboost, party
Enhances parallel
Depends On Me a4Classif, pRoloc, SigCheck
Imports Me
Suggests Me BiocCaseStudies
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