To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MLInterfaces")

In most cases, you don't need to download the package archive at all.

MLInterfaces

 

   

Uniform interfaces to R machine learning procedures for data in Bioconductor containers

Bioconductor version: Release (3.2)

This package provides uniform interfaces to machine learning code for data in R and Bioconductor containers.

Author: Vince Carey <stvjc at channing.harvard.edu>, Robert Gentleman, Jess Mar, and contributions from Jason Vertrees <jv at cs.dartmouth.edu> and Laurent Gatto <lg390 at cam.ac.uk>

Maintainer: V. Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("MLInterfaces")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MLInterfaces")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MLInterfaces")

 

PDF A machine learning tutorial: applications of the Bioconductor MLInterfaces package to expression and ChIP-Seq data
PDF MLInterfaces Computer Cluster
PDF MLInterfaces devel for schema-based MLearn
PDF MLInterfaces Primer
PDF   Reference Manual
Text   NEWS

Details

biocViews Classification, Clustering, Software
Version 1.50.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License LGPL
Depends R (>= 2.9), methods, BiocGenerics(>= 0.13.11), Biobase, annotate, cluster
Imports gdata, pls, sfsmisc, MASS, rpart, rda, genefilter, fpc, ggvis, shiny, rgl, gbm, RColorBrewer, hwriter, threejs, mlbench
LinkingTo
Suggests class, e1071, ipred, randomForest, gpls, pamr, nnet, ALL, hgu95av2.db, som, hu6800.db, lattice, caret (>= 5.07), golubEsets, ada, keggorthology, kernlab, mboost, party
SystemRequirements
Enhances parallel
URL
Depends On Me a4Classif, pRoloc, SigCheck
Imports Me
Suggests Me BiocCaseStudies
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MLInterfaces_1.50.0.tar.gz
Windows Binary MLInterfaces_1.50.0.zip
Mac OS X 10.6 (Snow Leopard) MLInterfaces_1.50.0.tgz
Mac OS X 10.9 (Mavericks) MLInterfaces_1.50.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/MLInterfaces/tree/release-3.2
Package Short Url http://bioconductor.org/packages/MLInterfaces/
Package Downloads Report Download Stats

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