Omixer

DOI: 10.18129/B9.bioc.Omixer    

Randomize Samples for -omics Profiling

Bioconductor version: Release (3.13)

Omixer - an R package for multivariate and reproducible randomization with lab-friendly sample layouts. Omixer ensures optimal sample distribution across batches with well-documented methods, and can output lab-friendly sample sheets for the wet lab if needed.

Author: Lucy Sinke [cre, aut]

Maintainer: Lucy Sinke <l.j.sinke at lumc.nl>

Citation (from within R, enter citation("Omixer")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Omixer")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Omixer")

 

HTML R Script my-vignette
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews DataRepresentation, ExperimentalDesign, QualityControl, Software, Visualization
Version 1.2.3
In Bioconductor since BioC 3.12 (R-4.0) (1 year)
License MIT + file LICENSE
Depends R (>= 4.0)
Imports dplyr, ggplot2, forcats, tibble, gridExtra, magrittr, readr, tidyselect, grid, stats, stringr, RColorBrewer
LinkingTo
Suggests knitr, rmarkdown, BiocStyle, magick, testthat
SystemRequirements
Enhances
URL
BugReports
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Omixer_1.2.3.tar.gz
Windows Binary Omixer_1.2.3.zip
macOS 10.13 (High Sierra) Omixer_1.2.3.tgz
Source Repository git clone https://git.bioconductor.org/packages/Omixer
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Omixer
Package Short Url https://bioconductor.org/packages/Omixer/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.13 Source Archive

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