RPA

RPA: Robust Probabilistic Averaging for probe-level analysis

Bioconductor version: Release (2.14)

Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays. Lahti et al. "Probabilistic Analysis of Probe Reliability in Differential Gene Expression Studies with Short Oligonucleotide Arrays", TCBB/IEEE, 2011. http://doi.ieeecomputersociety.org/10.1109/TCBB.2009.38

Author: Leo Lahti <leo.lahti at iki.fi>

Maintainer: Leo Lahti <leo.lahti at iki.fi>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RPA")

To cite this package in a publication, start R and enter:

    citation("RPA")

Documentation

PDF R Script RPA
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews GeneExpression, Microarray, Preprocessing, QualityControl, Software
Version 1.20.0
In Bioconductor since BioC 2.5 (R-2.10)
License BSD_2_clause + file LICENSE
Depends R (>= 2.15.0), affy, affydata, methods, parallel
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source RPA_1.20.0.tar.gz
Windows Binary RPA_1.20.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RPA_1.20.0.tgz
Mac OS X 10.9 (Mavericks)
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