biodbExpasy

DOI: 10.18129/B9.bioc.biodbExpasy    

biodbExpasy, a library for connecting to Expasy ENZYME database.

Bioconductor version: Release (3.15)

The biodbExpasy library provides access to Expasy ENZYME database, using biodb package framework. It allows to retrieve entries by their accession number. Web services can be accessed for searching the database by name or comments.

Author: Pierrick Roger [aut, cre]

Maintainer: Pierrick Roger <pierrick.roger at cea.fr>

Citation (from within R, enter citation("biodbExpasy")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("biodbExpasy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biodbExpasy")

 

HTML R Script Introduction to the biodbExpasy package.
PDF   Reference Manual
Text   NEWS

Details

biocViews DataImport, Infrastructure, Software
Version 1.0.0
In Bioconductor since BioC 3.15 (R-4.2) (< 6 months)
License AGPL-3
Depends R (>= 4.1)
Imports biodb(>= 1.3.1), R6, stringr, chk
LinkingTo
Suggests roxygen2, BiocStyle, testthat (>= 2.0.0), devtools, knitr, rmarkdown, covr, lgr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package biodbExpasy_1.0.0.tar.gz
Windows Binary biodbExpasy_1.0.0.zip
macOS 10.13 (High Sierra) biodbExpasy_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/biodbExpasy
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/biodbExpasy
Package Short Url https://bioconductor.org/packages/biodbExpasy/
Package Downloads Report Download Stats

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