To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("fastLiquidAssociation")

In most cases, you don't need to download the package archive at all.

fastLiquidAssociation

functions for genome-wide application of Liquid Association

Bioconductor version: Release (3.0)

This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.

Author: Tina Gunderson

Maintainer: Tina Gunderson <gunderson.tina at gmail.com>

Citation (from within R, enter citation("fastLiquidAssociation")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("fastLiquidAssociation")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("fastLiquidAssociation")

 

PDF fastLiquidAssociation Vignette
PDF   Reference Manual

Details

biocViews CellBiology, GeneExpression, Genetics, Pathways, Software
Version 1.2.1
In Bioconductor since BioC 2.14 (R-3.1)
License GPL-2
Depends methods, LiquidAssociation, parallel, stats, Hmisc
Imports WGCNA
Suggests GOstats, yeastCC, org.Sc.sgd.db
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source fastLiquidAssociation_1.2.1.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard) fastLiquidAssociation_1.2.1.tgz
Mac OS X 10.9 (Mavericks) fastLiquidAssociation_1.2.1.tgz
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