flowMeans

DOI: 10.18129/B9.bioc.flowMeans    

Non-parametric Flow Cytometry Data Gating

Bioconductor version: Release (3.8)

Identifies cell populations in Flow Cytometry data using non-parametric clustering and segmented-regression-based change point detection. Note: R 2.11.0 or newer is required.

Author: Nima Aghaeepour

Maintainer: Nima Aghaeepour <naghaeep at gmail.com>

Citation (from within R, enter citation("flowMeans")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("flowMeans", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowMeans")

 

PDF R Script flowMeans: Non-parametric Flow Cytometry Data Gating
PDF   Reference Manual

Details

biocViews CellBiology, Clustering, FlowCytometry, Software
Version 1.42.0
In Bioconductor since BioC 2.6 (R-2.11) (8.5 years)
License Artistic-2.0
Depends R (>= 2.10.0)
Imports Biobase, graphics, grDevices, methods, rrcov, stats, feature, flowCore
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me CONFESS, flowType
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowMeans_1.42.0.tar.gz
Windows Binary flowMeans_1.42.0.zip
Mac OS X 10.11 (El Capitan) flowMeans_1.42.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowMeans
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowMeans
Package Short Url http://bioconductor.org/packages/flowMeans/
Package Downloads Report Download Stats

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