To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("frma")

In most cases, you don't need to download the package archive at all.

frma

 

Frozen RMA and Barcode

Bioconductor version: Release (3.1)

Preprocessing and analysis for single microarrays and microarray batches.

Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("frma")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("frma")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("frma")

 

PDF R Script frma: Preprocessing for single arrays and array batches
PDF   Reference Manual
Text   NEWS

Details

biocViews Microarray, Preprocessing, Software
Version 1.20.0
In Bioconductor since BioC 2.6 (R-2.11) (5 years)
License GPL (>= 2)
Depends R (>= 2.10.0), Biobase(>= 2.6.0)
Imports Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils, BiocGenerics
LinkingTo
Suggests hgu133afrmavecs, frmaExampleData
SystemRequirements
Enhances
URL http://bioconductor.org
Depends On Me
Imports Me ChIPXpress, DeSousa2013
Suggests Me antiProfilesData, frmaTools
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source frma_1.20.0.tar.gz
Windows Binary frma_1.20.0.zip
Mac OS X 10.6 (Snow Leopard) frma_1.20.0.tgz
Mac OS X 10.9 (Mavericks) frma_1.20.0.tgz
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