To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("gwascat")

In most cases, you don't need to download the package archive at all.

gwascat

representing and modeling data in the NHGRI GWAS catalog

Bioconductor version: Release (2.14)

representing and modeling data in the NHGRI GWAS catalog

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("gwascat")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("gwascat")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("gwascat")

 

PDF R Script gwascat -- exploring NHGRI GWAS catalog
PDF   Reference Manual
Text   NEWS

Details

biocViews Genetics, Software
Version 1.8.0
In Bioconductor since BioC 2.10 (R-2.15)
License Artistic-2.0
Depends R (>= 3.0.0)
Imports methods, Biostrings, IRanges, GenomicRanges, BiocGenerics, snpStats, Rsamtools, rtracklayer
Suggests DO.db, Gviz, ggbio, graph
System Requirements
URL
Depends On Me
Imports Me
Suggests Me vtpnet

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source gwascat_1.8.0.tar.gz
Windows Binary gwascat_1.8.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) gwascat_1.8.0.tgz
Mac OS X 10.9 (Mavericks) gwascat_1.8.0.tgz
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