To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("illuminaio")

In most cases, you don't need to download the package archive at all.

illuminaio

Parsing Illumina microarray output files

Bioconductor version: Release (3.0)

Tools for parsing Illuminas microarray output files, including IDAT.

Author: Keith Baggerly [aut], Henrik Bengtsson [aut], Kasper Daniel Hansen [aut, cre], Matt Ritchie [aut], Mike L. Smith [aut], Tim Triche Jr. [ctb]

Maintainer: Kasper Daniel Hansen <khansen at jhsph.edu>

Citation (from within R, enter citation("illuminaio")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("illuminaio")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("illuminaio")

 

PDF R Script Description of Encrypted IDAT Format
PDF R Script Introduction to illuminaio
PDF   Reference Manual
Text   NEWS

Details

biocViews DataImport, Infrastructure, Software
Version 0.8.0
In Bioconductor since BioC 2.12 (R-3.0)
License GPL-2
Depends
Imports base64
Suggests RUnit, BiocGenerics, IlluminaDataTestFiles(>= 1.0.2), BiocStyle
System Requirements
URL https://github.com/HenrikBengtsson/illuminaio
Depends On Me
Imports Me beadarray, crlmm, methylumi, minfi
Suggests Me limma

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source illuminaio_0.8.0.tar.gz
Windows Binary illuminaio_0.8.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) illuminaio_0.8.0.tgz
Mac OS X 10.9 (Mavericks) illuminaio_0.8.0.tgz
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