To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("rhdf5")

In most cases, you don't need to download the package archive at all.

rhdf5

HDF5 interface to R

Bioconductor version: Release (2.14)

This R/Bioconductor package provides an interface between HDF5 and R. HDF5's main features are the ability to store and access very large and/or complex datasets and a wide variety of metadata on mass storage (disk) through a completely portable file format. The rhdf5 package is thus suited for the exchange of large and/or complex datasets between R and other software package, and for letting R applications work on datasets that are larger than the available RAM.

Author: Bernd Fischer, Gregoire Pau

Maintainer: Bernd Fischer <bernd.fischer at embl.de>

To install this package, start R and enter:

Citation (from within R, enter citation("rhdf5")):

Installation

source("http://bioconductor.org/biocLite.R")
biocLite("rhdf5")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rhdf5")

 

PDF R Script rhdf5
PDF   Reference Manual
Text   NEWS

Details

biocViews DataImport, Infrastructure, Software
Version 2.8.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier
License Artistic-2.0
Depends methods
Imports zlibbioc
Suggests bit64, BiocStyle
System Requirements GNU make
URL
Depends On Me GENE.E, GSCA
Imports Me GENE.E, h5vc
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source rhdf5_2.8.0.tar.gz
Windows Binary rhdf5_2.8.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) rhdf5_2.8.0.tgz
Mac OS X 10.9 (Mavericks) rhdf5_2.8.0.tgz
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