To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("survcomp")

In most cases, you don't need to download the package archive at all.

survcomp

Performance Assessment and Comparison for Survival Analysis

Bioconductor version: Release (3.0)

R package providing functions to assess and to compare the performance of risk prediction (survival) models.

Author: Benjamin Haibe-Kains, Markus Schroeder, Catharina Olsen, Christos Sotiriou, Gianluca Bontempi, John Quackenbush

Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at utoronto.ca>, Markus Schroeder <markus.schroeder at ucdconnect.ie>, Catharina Olsen <colsen at ulb.ac.be>

Citation (from within R, enter citation("survcomp")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("survcomp")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("survcomp")

 

PDF R Script SurvComp: a package for performance assessment and comparison for survival analysis
PDF   Reference Manual

Details

biocViews DifferentialExpression, GeneExpression, Software, Visualization
Version 1.16.0
In Bioconductor since BioC 2.8 (R-2.13)
License Artistic-2.0
Depends survival, prodlim, R (>= 2.10)
Imports ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid, rmeta
Suggests Hmisc, CPE, clinfun, Biobase
System Requirements
URL http://www.pmgenomics.ca/bhklab/
Depends On Me genefu
Imports Me
Suggests Me breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX, metaseqR

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source survcomp_1.16.0.tar.gz
Windows Binary survcomp_1.16.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) survcomp_1.16.0.tgz
Mac OS X 10.9 (Mavericks) survcomp_1.16.0.tgz
Browse/checkout source (username/password: readonly)
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