To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Alyrata.JGI.v1")

In most cases, you don't need to download the package archive at all.

BSgenome.Alyrata.JGI.v1

Arabidopsis lyrata full genome (JGI version V1.0)

Bioconductor version: Release (2.14)

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel

Maintainer: Jian-Feng Mao <jianfeng.mao at gmail.com>

Citation (from within R, enter citation("BSgenome.Alyrata.JGI.v1")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Alyrata.JGI.v1")

Documentation

PDF   Reference Manual

Details

biocViews Alyrata, AnnotationData, Genetics
Version 1.0.0
License Artistic-2.0
Depends BSgenome(>= 1.19.5)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Alyrata.JGI.v1_1.0.0.tar.gz
Windows Binary BSgenome.Alyrata.JGI.v1_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Alyrata.JGI.v1_1.0.0.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Alyrata.JGI.v1_1.0.0.tgz
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