To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Athaliana.TAIR.TAIR9")

In most cases, you don't need to download the package archive at all.

BSgenome.Athaliana.TAIR.TAIR9

Full genome sequences for Arabidopsis thaliana (TAIR9)

Bioconductor version: Release (3.0)

Full genome sequences for Arabidopsis thaliana as provided by TAIR (TAIR9 Genome Release) and stored in Biostrings objects. Note that TAIR10 is an "annotation release" based on the same genome assembly as TAIR9.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Athaliana.TAIR.TAIR9")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Athaliana.TAIR.TAIR9")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Arabidopsis_thaliana, BSgenome, Genetics
Version 1.3.1000
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me waveTiling

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Athaliana.TAIR.TAIR9_1.3.1000.tar.gz
Windows Binary BSgenome.Athaliana.TAIR.TAIR9_1.3.1000.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Athaliana.TAIR.TAIR9_1.3.1000.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Athaliana.TAIR.TAIR9_1.3.1000.tgz
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