To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Celegans.UCSC.ce2")

In most cases, you don't need to download the package archive at all.

BSgenome.Celegans.UCSC.ce2

Full genome sequences for Caenorhabditis elegans (UCSC version ce2)

Bioconductor version: Release (3.0)

Full genome sequences for Caenorhabditis elegans (Worm) as provided by UCSC (ce2, Mar. 2004) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Celegans.UCSC.ce2")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Celegans.UCSC.ce2")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Caenorhabditis_elegans, Genetics
Version 1.4.0
License Artistic-2.0
Depends BSgenome(>= 1.33.5)
Imports BSgenome
Suggests GenomicFeatures
System Requirements
URL
Depends On Me REDseq
Imports Me
Suggests Me Biostrings, BSgenome, GenomeInfoDb, GenomicFeatures, IRanges

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Celegans.UCSC.ce2_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
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