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BSgenome.Dmelanogaster.UCSC.dm3

This is the released version of BSgenome.Dmelanogaster.UCSC.dm3; for the devel version, see BSgenome.Dmelanogaster.UCSC.dm3.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Full genome sequences for Drosophila melanogaster (UCSC version dm3)


Bioconductor version: Release (3.23)

Full genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm3, Apr. 2006) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Dmelanogaster.UCSC.dm3")):

The Bioconductor Dev Team. BSgenome.Dmelanogaster.UCSC.dm3: Full genome sequences for Drosophila melanogaster (UCSC version dm3). doi:10.18129/B9.bioc.BSgenome.Dmelanogaster.UCSC.dm3, R package version 1.4.0, https://bioconductor.org/packages/BSgenome.Dmelanogaster.UCSC.dm3.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Dmelanogaster.UCSC.dm3")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews AnnotationData, BSgenome, Drosophila_melanogaster, Genetics
Version1.4.0
In Bioconductor sinceBioC 2.5 (R-2.10) or earlier (> 17 years)
License Artistic-2.0
Depends BSgenome (>= 1.33.5)
Imports BSgenome
System Requirements
URL
See More
Suggests TxDb.Dmelanogaster.UCSC.dm3.ensGene
Linking To
Enhances
Depends On Me BSgenome.Dmelanogaster.UCSC.dm3.masked
Imports Me BSgenome.Dmelanogaster.UCSC.dm3.masked
Suggests Me Biostrings, CAGEr, easyRNASeq, GenomicAlignments, GenomicFeatures, gmapR, memes, PWMEnrich
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Dmelanogaster.UCSC.dm3_1.4.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Dmelanogaster.UCSC.dm3/
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