To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg18")

In most cases, you don't need to download the package archive at all.

BSgenome.Hsapiens.UCSC.hg18

Full genome sequences for Homo sapiens (UCSC version hg18)

Bioconductor version: Release (2.14)

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg18, Mar. 2006) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Hsapiens.UCSC.hg18")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Hsapiens.UCSC.hg18")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version 1.3.1000
License Artistic-2.0
Depends BSgenome(>= 1.32.0)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me BSgenome.Hsapiens.UCSC.hg18.masked, FDb.InfiniumMethylation.hg18
Imports Me BSgenome.Hsapiens.UCSC.hg18.masked
Suggests Me ArrayTV, Biostrings, charm, GenomicFeatures, MEDME, MethylSeekR, Repitools, rGADEM, SNPlocs.Hsapiens.dbSNP.20090506

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Hsapiens.UCSC.hg18_1.3.1000.tar.gz
Windows Binary BSgenome.Hsapiens.UCSC.hg18_1.3.99.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Hsapiens.UCSC.hg18_1.3.99.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Hsapiens.UCSC.hg18_1.3.99.tgz
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