To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Sscrofa.UCSC.susScr3")

In most cases, you don't need to download the package archive at all.

BSgenome.Sscrofa.UCSC.susScr3

Full genome sequences for Sus scrofa (UCSC version susScr3)

Bioconductor version: Release (2.14)

Full genome sequences for Sus scrofa (Pig) as provided by UCSC (susScr3, Aug. 2011) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Sscrofa.UCSC.susScr3")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Sscrofa.UCSC.susScr3")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Genetics, Sus_scrofa
Version 1.3.1000
License Artistic-2.0
Depends BSgenome(>= 1.32.0)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me BSgenome.Sscrofa.UCSC.susScr3.masked
Imports Me BSgenome.Sscrofa.UCSC.susScr3.masked
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Sscrofa.UCSC.susScr3_1.3.1000.tar.gz
Windows Binary BSgenome.Sscrofa.UCSC.susScr3_1.3.99.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Sscrofa.UCSC.susScr3_1.3.99.tgz
Mac OS X 10.9 (Mavericks) BSgenome.Sscrofa.UCSC.susScr3_1.3.99.tgz
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