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EuPathDB

This is the released version of EuPathDB; for the devel version, see EuPathDB.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8

Provides access to pathogen annotation resources available on EuPathDB databases

DOI: 10.18129/B9.bioc.EuPathDB

Bioconductor version: Release (3.23)

Brings together annotation resources from the various EuPathDB databases (PlasmoDB, ToxoDB, TriTrypDB, etc.) and makes them available in R using the AnnotationHub framework.

Author: Keith Hughitt [aut, cre]

Maintainer: Keith Hughitt <keith.hughitt at gmail.com>

Citation (from within R, enter citation("EuPathDB")):

Keith Hughitt. EuPathDB: Provides access to pathogen annotation resources available on EuPathDB databases. doi:10.18129/B9.bioc.EuPathDB, R package version 1.0.1, https://bioconductor.org/packages/EuPathDB.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EuPathDB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EuPathDB")

Details

Package Archives

Follow Installation instructions to use this package in your R session.