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CopyNeutralIMA

This is the released version of CopyNeutralIMA; for the devel version, see CopyNeutralIMA.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8

Copy Neutral Illumina Methylation Arrays


Bioconductor version: Release (3.23)

Provides a set of genomic copy neutral samples hybridized using Illumina Methylation arrays (450k and EPIC).

Author: Xavier Pastor Hostench [aut, cre], Moritz Przybilla [aut]

Maintainer: Xavier Pastor Hostench <xavier.pastor at compbio-dev.com>

Citation (from within R, enter citation("CopyNeutralIMA")):

Xavier Pastor Hostench, Moritz Przybilla. CopyNeutralIMA: Copy Neutral Illumina Methylation Arrays. doi:10.18129/B9.bioc.CopyNeutralIMA, R package version 1.30.0, https://bioconductor.org/packages/CopyNeutralIMA.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CopyNeutralIMA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CopyNeutralIMA")
CopyNeutralIMA HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, TwoChannelData
Version1.30.0
In Bioconductor sinceBioC 3.8 (R-3.5) (8 years)
License Artistic-2.0
Depends R (>= 3.5.0)
Imports ExperimentHub, Rdpack (>= 0.8)
System Requirements
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Suggests BiocStyle, knitr, rmarkdown, minfi, conumee, minfiData
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CopyNeutralIMA_1.30.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/CopyNeutralIMA
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/CopyNeutralIMA
Package Short Url https://bioconductor.org/packages/CopyNeutralIMA/
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