KEGGdzPathwaysGEO

KEGG Disease Datasets from GEO

Bioconductor version: Release (2.14)

This is a collection of 24 data sets for which the phenotype is a disease with a corresponding pathway in the KEGG database.This collection of datasets were used as gold standard in comparing gene set analysis methods by the PADOG package.

Author: Gaurav Bhatti, Adi L. Tarca

Maintainer: Gaurav Bhatti <gbhatti at med.wayne.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("KEGGdzPathwaysGEO")

To cite this package in a publication, start R and enter:

    citation("KEGGdzPathwaysGEO")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData
Version 1.2.0
License GPL-2
Depends R (>= 2.13.0)
Imports Biobase, BiocGenerics
Suggests
System Requirements
URL
Depends On Me PADOG
Imports Me
Suggests Me

Package Downloads

Package Source KEGGdzPathwaysGEO_1.2.0.tar.gz
Windows Binary KEGGdzPathwaysGEO_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) KEGGdzPathwaysGEO_1.2.0.tgz
Mac OS X 10.9 (Mavericks) KEGGdzPathwaysGEO_1.2.0.tgz
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