RnaSeqSampleSizeData

DOI: 10.18129/B9.bioc.RnaSeqSampleSizeData    

RnaSeqSampleSizeData

Bioconductor version: Release (3.7)

RnaSeqSampleSizeData package provides the read counts and dispersion distribution from real RNA-seq experiments. It can be used by RnaSeqSampleSize package to estimate sample size and power for RNA-seq experiment design.

Author: Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr

Maintainer: Shilin Zhao <zhaoshilin at gmail.com>

Citation (from within R, enter citation("RnaSeqSampleSizeData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RnaSeqSampleSizeData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RnaSeqSampleSizeData")

 

PDF R Script RnaSeqSampleSizeData: Read counts and dispersion distribution from real data for sample size estimation of RNA-seq experiments
PDF   Reference Manual
Text   NEWS

Details

biocViews CancerData, ExperimentData, RNASeqData
Version 1.12.0
License GPL (>= 2)
Depends edgeR, R (>= 2.10)
Imports
LinkingTo
Suggests BiocStyle, knitr
SystemRequirements
Enhances
URL
Depends On Me RnaSeqSampleSize
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RnaSeqSampleSizeData_1.12.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/RnaSeqSampleSizeData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RnaSeqSampleSizeData
Package Short Url http://bioconductor.org/packages/RnaSeqSampleSizeData/
Package Downloads Report Download Stats

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