To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("antiProfilesData")

In most cases, you don't need to download the package archive at all.

antiProfilesData

Normal colon and cancer preprocessed affy data for antiProfile building.

Bioconductor version: Release (2.14)

Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the 'frma' package

Author: Hector Corrada Bravo, Matthew McCall and Rafael A. Irizarry

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Citation (from within R, enter citation("antiProfilesData")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("antiProfilesData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("antiProfilesData")

 

PDF   Reference Manual

Details

biocViews Cancer, ExperimentData, NormalTissue, RNAExpressionData
Version 1.0.0
License Artistic-2.0
Depends Biobase
Imports
Suggests frma, GEOquery, GEOmetadb
System Requirements
URL
Depends On Me
Imports Me
Suggests Me antiProfiles, epivizr, messina

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source antiProfilesData_1.0.0.tar.gz
Windows Binary antiProfilesData_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) antiProfilesData_1.0.0.tgz
Mac OS X 10.9 (Mavericks) antiProfilesData_1.0.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center