To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("chipenrich.data")

In most cases, you don't need to download the package archive at all.

chipenrich.data

 

Gene set enrichment analysis for ChIP-seq data

Bioconductor version: Release (3.1)

Supporting data for the chipenrich package. Includes pre-defined gene sets, gene locus definitions, and mappability estimates.

Author: Ryan P. Welch [aut, cre, cph], Chee Lee [aut, cre], Raymond G. Cavalcante [aut, cre], Laura J. Scott [ths], Maureen A. Sartor [ths]

Maintainer: Ryan P. Welch <welchr at umich.edu>, Chee Lee <cheelee at umich.edu>, Raymond G. Cavalcante <rcavalca at umich.edu>

Citation (from within R, enter citation("chipenrich.data")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("chipenrich.data")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews ChIPSeqData, ExperimentData, Genome
Version 1.4.0
License GPL-3
Depends R (>= 2.15.0)
Imports methods, GenomicRanges(>= 1.10.0), IRanges(>= 1.16.0), BiocGenerics(>= 0.2.0)
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me chipenrich
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source chipenrich.data_1.4.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/chipenrich.data/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center