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prebsdata

Data for 'prebs' package


Bioconductor version: Release (3.18)

This package contains data required to run examples in 'prebs' package. The data files include: 1) Small sample bam files for demonstration purposes 2) Probe sequence mappings for Custom CDF (taken from http://brainarray.mbni.med.umich.edu/brainarray/Database/CustomCDF/genomic_curated_CDF.asp) 3) Probe sequence mappings for manufacturer's CDF (manually created using bowtie)

Author: Karolis Uziela and Antti Honkela

Maintainer: Karolis Uziela <karolis.uziela at scilifelab.se>

Citation (from within R, enter citation("prebsdata")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("prebsdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prebsdata")
prebsdata User Guide PDF
Reference Manual PDF

Details

biocViews ExperimentData, RNASeqData, SequencingData
Version 1.38.0
License Artistic-2.0
Depends R (>= 2.14.0)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me prebs, SigFuge
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package prebsdata_1.38.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/prebsdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/prebsdata
Package Short Url https://bioconductor.org/packages/prebsdata/
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