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Recent Commits

Last 10 commit to Bioconductor release:

SynExtend2025-05-14 10:44:01 -0400
LimROTS2025-05-14 14:17:56 +0300
scrapper2025-05-13 13:05:58 -0700
biocmake2025-05-13 09:41:36 -0700
ggspavis2025-05-12 17:40:51 -0400
rigvf2025-05-12 14:31:17 -0400
doppelgangR2025-05-12 12:29:28 -0400
tximeta2025-05-12 09:44:40 -0400
MOSClip2025-05-12 12:08:55 +0200
MetaboCoreUtils2025-05-09 11:31:24 +0200

Last 10 commit to Bioconductor devel:

geomeTriD2025-05-14 14:41:49 -0400
pathlinkR2025-05-14 08:56:33 -0700
fastreeR2025-05-14 15:13:24 +0000
SynExtend2025-05-14 10:27:27 -0400
BiocFileCache2025-05-14 09:48:58 -0400
LimROTS2025-05-14 15:07:56 +0300
scrapper2025-05-13 13:05:58 -0700
biocmake2025-05-13 09:34:34 -0700
DNAfusion2025-05-13 13:26:04 +0200
rigvf2025-05-12 14:29:15 -0400

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Newest Packages

Software Packages

DNEA Differential Network Enrichment Analysis for Biological Data
Coralysis Coralysis sensitive identification of imbalanced cell types and states in single-cell data via multi-level integration
crupR An R package to predict condition-specific enhancers from ChIP-seq data
TaxSEA Taxon Set Enrichment Analysis
QRscore Quantile Rank Score
islify Automatic scoring and classification of cell-based assay images
imageTCGA TCGA Diagnostic Image Database Explorer
mitology Study of mitochondrial activity from RNA-seq data
scHiCcompare Differential Analysis of Single-cell Hi-C Data
BreastSubtypeR Methods for breast cancer intrinsic subtyping

Experiment Data Packages

muSpaData Multi-sample multi-group spatially resolved transcriptomic data
TENET.ExperimentHub Experiment data for the TENET package
humanHippocampus2024 Access to SRT and snRNA-seq data from spatial_HPC project
eoPredData ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile
ProteinGymR Programmatic access to ProteinGym datasets in R/Bioconductor
CoSIAdata VST normalized RNA-Sequencing data with annotations for multiple species samples from Bgee
LegATo LegATo: Longitudinal mEtaGenomic Analysis Toolkit
EpipwR.data EpipwR.data: Reference data for EpipwR
bugphyzz A harmonized data resource and software for enrichment analysis of microbial physiologies
homosapienDEE2CellScore Example Data Package for CellScore

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Single Package Builder

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Recent Builds
igblastr 2025-05-14T19:47:55
anglemania 2025-05-14T08:41:34
anglemania 2025-05-13T14:42:26
anglemania 2025-05-13T07:59:31
BenchHub 2025-05-12T14:52:05
HVP 2025-05-07T03:32:17
msigdbeh 2025-05-06T18:28:28
BenchHub 2025-05-05T12:41:04
spbtest5 2025-05-05T11:01:24
spbtest5 2025-05-05T10:33:52
AWAggregatorData 2025-05-03T02:14:21
igblastr 2025-05-01T18:17:55
igblastr 2025-05-01T15:50:58
AWAggregatorData 2025-05-01T15:50:41
DNEA 2025-04-23T19:54:22
HVP 2025-04-17T18:49:01
HVP 2025-04-17T18:20:35
LipidTrend 2025-04-17T09:01:38
batchCorr 2025-04-16T10:57:08
DNEA 2025-04-14T22:40:57
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Mirror Status

Last updated 2025-05-13T20:05:42-04:00. (Will be updated every 24 hours).

To use a Bioconductor mirror use the R function `chooseBioCmirror()`
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https://ftp.gwdg.de/pub/misc/bioconductor/ yes yes yes
https://bioconductor.riken.jp/ yes yes no
https://free.nchc.org.tw/bioconductor/ yes no no
https://mirrors.tuna.tsinghua.edu.cn/bioconductor/ yes yes yes
https://mirrors.nju.edu.cn/bioconductor/ yes yes yes
https://mirrors.ustc.edu.cn/bioc/ yes no no
https://mirrors.westlake.edu.cn/bioconductor no yes no
https://mirrors.zju.edu.cn/bioconductor no yes yes
https://bioconductor.uib.no/ yes yes yes
https://bioconductor.unipi.it no no no
https://cran.asia no yes yes
https://mirror.aarnet.edu.au/pub/bioconductor no no no
https://mirrors.dotsrc.org/bioconductor/ yes yes yes
https://mirror.accum.se/mirror/bioconductor.org/ yes yes yes
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