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CENTREprecomputed

This package is for version 3.23 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see CENTREprecomputed.

All versions

3.23 (release), 3.22

Hub package for the precomputed data of CENTRE and example data

DOI: 10.18129/B9.bioc.CENTREprecomputed

Bioconductor version: Release (3.23)

Interface and documentation for the Experiment Hub records needed by the CENTRE Bioconductor software package. The Experiment Hub records contains the precomputed fisher combined p-values, CRUP correlations. Additionally, the records hold ChIP-seq and RNA-seq data used for the example of the software package.

Author: Sara Lopez Ruiz de Vargas [aut, cre] ORCID: 0000-0002-1290-4774

Maintainer: Sara Lopez Ruiz de Vargas <lopez_s at molgen.mpg.de>

Citation (from within R, enter citation("CENTREprecomputed")):

Sara Lopez Ruiz de Vargas. CENTREprecomputed: Hub package for the precomputed data of CENTRE and example data. doi:10.18129/B9.bioc.CENTREprecomputed, R package version 1.2.0, https://bioconductor.org/packages/CENTREprecomputed.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CENTREprecomputed")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CENTREprecomputed")

Details

Package Archives

Follow Installation instructions to use this package in your R session.