MSstatsQC

Longitudinal system suitability monitoring and quality control for proteomic experiments

Bioconductor version: 3.23 · Package version: 2.30.0

MSstatsQC is an R package which provides longitudinal system suitability monitoring and quality control tools for proteomic experiments.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsQC")

Maintainer	Eralp Dogu <eralp.dogu@gmail.com>
Author	Eralp Dogu [aut, cre] (ORCID: <https://orcid.org/0000-0002-8256-7304>), Sara Taheri [aut] (ORCID: <https://orcid.org/0000-0002-6554-9083>), Olga Vitek [aut] (ORCID: <https://orcid.org/0000-0003-1728-1104>)
License	Artistic License 2.0
URL	http://msstats.org/msstatsqc
Bug Reports	https://groups.google.com/forum/#!forum/msstatsqc
Downloads rank	280
Source branch	RELEASE_3_23
biocViews	MassSpectrometry, Normalization, Proteomics, QualityControl, Software

Dependencies

Depends: R (>= 3.5.0)

Imports: dplyr, plyr, plotly, ggplot2, ggExtra, stats, grid, MSnbase, qcmetrics, h2o, FrF2, car, reshape2, jsonlite

Suggests: knitr, rmarkdown, testthat, RforProteomics

Reverse dependencies

Imports Me (1): MSstatsQCgui