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PhyloProfileData

This is the released version of PhyloProfileData; for the devel version, see PhyloProfileData.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10

Data package for phylogenetic profile analysis using PhyloProfile tool


Bioconductor version: Release (3.23)

Two experimental datasets to illustrate running and analysing phylogenetic profiles with PhyloProfile package.

Author: Vinh Tran [aut, cre] ORCID iD ORCID: 0000-0001-6772-7595 , Ingo Ebersberger [aut], Hannah Mülbaier [ctb], Arpit Jain [ctb]

Maintainer: Vinh Tran <v.tran at ub.uni-frankfurt.de>

Citation (from within R, enter citation("PhyloProfileData")):

Vinh Tran, Ingo Ebersberger. PhyloProfileData: Data package for phylogenetic profile analysis using PhyloProfile tool. doi:10.18129/B9.bioc.PhyloProfileData, R package version 1.26.1, https://bioconductor.org/packages/PhyloProfileData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PhyloProfileData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PhyloProfileData")
PhyloProfileData HTML R Script
Reference ManualPDF
NEWSText
LICENSEText

Details

biocViews ExperimentData, ExperimentHub, ReproducibleResearch
Version1.26.1
In Bioconductor sinceBioC 3.10 (R-3.6) (7 years)
License MIT + file LICENSE
Depends R (>= 4.5.0)
Imports ExperimentHub, Biostrings, BiocStyle
System Requirements
URLhttps://github.com/BIONF/PhyloProfileData
Bug Reportshttps://github.com/trvinh/PhyloProfileData/issues
See More
Suggests knitr, rmarkdown
Linking To
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Depends On Me
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Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PhyloProfileData_1.26.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/PhyloProfileData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/PhyloProfileData
Package Short Url https://bioconductor.org/packages/PhyloProfileData/
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