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SynMut

This is the released version of SynMut; for the devel version, see SynMut.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9

SynMut: Designing Synonymously Mutated Sequences with Different Genomic Signatures

DOI: 10.18129/B9.bioc.SynMut

Bioconductor version: Release (3.23)

There are increasing demands on designing virus mutants with specific dinucleotide or codon composition. This tool can take both dinucleotide preference and/or codon usage bias into account while designing mutants. It is a powerful tool for in silico designs of DNA sequence mutants.

Author: Haogao Gu [aut, cre], Leo L.M. Poon [led]

Maintainer: Haogao Gu <hggu at connect.hku.hk>

Citation (from within R, enter citation("SynMut")):

Haogao Gu. SynMut: SynMut: Designing Synonymously Mutated Sequences with Different Genomic Signatures. doi:10.18129/B9.bioc.SynMut, R package version 1.28.0, https://bioconductor.org/packages/SynMut.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SynMut")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SynMut")

Details

Package Archives

Follow Installation instructions to use this package in your R session.