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This is the development version of ABarray; for the stable release version, see ABarray.

Microarray QA and statistical data analysis for Applied Biosystems Genome Survey Microrarray (AB1700) gene expression data.

Bioconductor version: Development (3.20)

Automated pipline to perform gene expression analysis for Applied Biosystems Genome Survey Microarray (AB1700) data format. Functions include data preprocessing, filtering, control probe analysis, statistical analysis in one single function. A GUI interface is also provided. The raw data, processed data, graphics output and statistical results are organized into folders according to the analysis settings used.

Author: Yongming Andrew Sun

Maintainer: Yongming Andrew Sun <sunya at>

Citation (from within R, enter citation("ABarray")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

ABarray gene expression PDF
ABarray gene expression GUI interface PDF
Reference Manual PDF


biocViews Microarray, OneChannel, Preprocessing, Software
Version 1.73.0
In Bioconductor since BioC 1.9 (R-2.4) (18 years)
License GPL
Imports Biobase, graphics, grDevices, methods, multtest, stats, tcltk, utils
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Suggests limma, LPE
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Follow Installation instructions to use this package in your R session.

Source Package ABarray_1.73.0.tar.gz
Windows Binary
macOS Binary (x86_64) ABarray_1.73.0.tgz
macOS Binary (arm64) ABarray_1.73.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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