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BiocBuildReporter

This is the development version of BiocBuildReporter; for the stable release version, see BiocBuildReporter.

All Bioconductor versions of BiocBuildReporter

3.24 (devel), 3.23 (release)

Functions to process a bioconductor build report database

Bioconductor version: 3.24 · Package version: 1.1.1

This package reads remote parquet files that have processed Bioconductor build report logs. Users may query the tables directly for specific information or use pre-defined helper functions for common queries. The logs processed are from https://bioconductor.org/checkResults/. In the future we will extend this package out to include processing of r-universe logs.

Author: Sean Davis [aut], Lori Shepherd [aut, cre] ORCID iD ORCID: 0000-0002-3242-0582

Maintainer: Lori Shepherd <lori.shepherd at roswellpark.org>

DOI: 10.18129/B9.bioc.BiocBuildReporter

Citation

From within R, enter citation("BiocBuildReporter"):

Sean Davis, Lori Shepherd. BiocBuildReporter: Functions to process a bioconductor build report database. doi:10.18129/B9.bioc.BiocBuildReporter, R package version 1.1.1, https://bioconductor.org/packages/BiocBuildReporter.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("BiocBuildReporter")

For older versions of R, please refer to the appropriate Bioconductor release.

Details

Version1.1.1
LicenseApache License (>= 2)
URLhttps://github.com/lshep/BiocBuildReporter.git
Bug Reportshttps://github.com/lshep/BiocBuildReporter/issues
Last updated2026-05-20
In Bioconductor sinceBioC 3.23 (R-4.6) (less than a year)
Downloads rank2333 of 2,456
Source branchdevel
Build report Bioconductor build system, r-universe
biocViewsInfrastructure, Software
Package Short Url https://bioconductor.org/packages/BiocBuildReporter/

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocBuildReporter")
BiocBuildReporter Data Use Cases HTML R Script
Reference ManualPDF
NEWSText

Download

Follow the installation instructions to use this package in your R session.

Source packageBiocBuildReporter_1.1.1.tar.gz
Windows binary (x86_64)BiocBuildReporter_1.1.1.zip
macOS binary (arm64)BiocBuildReporter_1.1.1.tgz
macOS binary (x86_64)BiocBuildReporter_1.1.1.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/BiocBuildReporter
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/BiocBuildReporter
Package Downloads ReportDownload Stats
Dependencies

Depends: R (>= 4.5.0)

Imports: arrow, dplyr, BiocFileCache

Suggests: BiocStyle, testthat (>= 3.0.0), knitr, rmarkdown, ggplot2, tidyr, stringr