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This is the development version of CAMERA; for the stable release version, see CAMERA.
Bioconductor version: Development (3.18)
Annotation of peaklists generated by xcms, rule based annotation of isotopes and adducts, isotope validation, EIC correlation based tagging of unknown adducts and fragments
Author: Carsten Kuhl, Ralf Tautenhahn, Hendrik Treutler, Steffen Neumann {ckuhl|htreutle|sneumann}@ipb-halle.de, rtautenh@scripps.edu
Maintainer: Steffen Neumann <sneumann at ipb-halle.de>
Citation (from within R,
enter citation("CAMERA")
):
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") # The following initializes usage of Bioc devel BiocManager::install(version='devel') BiocManager::install("CAMERA")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | ImmunoOncology, MassSpectrometry, Metabolomics, Software |
Version | 1.57.0 |
In Bioconductor since | BioC 2.4 (R-2.9) (14 years) |
License | GPL (>= 2) |
Depends | R (>= 3.5.0), methods, Biobase, xcms(>= 1.13.5) |
Imports | methods, xcms, RBGL, graph, graphics, grDevices, stats, utils, Hmisc, igraph |
LinkingTo | |
Suggests | faahKO, RUnit, BiocGenerics |
SystemRequirements | |
Enhances | Rmpi, snow |
URL | http://msbi.ipb-halle.de/msbi/CAMERA/ |
BugReports | https://github.com/sneumann/CAMERA/issues/new |
Depends On Me | flagme, IPO, LOBSTAHS, MAIT, metaMS, PtH2O2lipids |
Imports Me | |
Suggests Me | cliqueMS, msPurity, mtbls2, RMassBank |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | CAMERA_1.57.0.zip |
macOS Binary (x86_64) | CAMERA_1.57.0.tgz |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/CAMERA |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/CAMERA |
Bioc Package Browser | https://code.bioconductor.org/browse/CAMERA/ |
Package Short Url | https://bioconductor.org/packages/CAMERA/ |
Package Downloads Report | Download Stats |
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